Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015851278.1_cds_XP_016511453.1_24192
CDS Infomation

[gene=LOC107828612] [db_xref=GeneID:107828612] [protein=uncharacterized protein LOC107828612 isoform X2] [protein_id=XP_016511453.1] [location=complement(join(43123..43737,43926..44009,44721..45418,45726..45956,46473..46949,48428..48550,50751..50754))] [gbkey=CDS]
Sequence

ATGATCAGCCGTTATTGCTCAGCTAAATCATACTTTGATGAAATTGAAGAACAAGATGAA
GGAGGGTCACGATCTGATATCGAAAATCAATCTCCTGCCCGTCTGCAGGATGCACTACTT
TCTAATAGTGGCAGGAAAACAAAGTGTCGGACACCGCAACAAATTCTTTATCAAGCTGCT
TTGCGAGATGATTGGGGAGCTGCTGAACCTATTCTGGAAAAGGATTTGAGTTTAGCTAGA
GCTAAGATGACGGAACGTGGTGAAAGAGTTCTTCACATTGCAGCTGTGGCAAGAAGCACA
CGATTTATACTGGAGCTAGTGAATAAAATGGAGGAAAGTGACTTGGAACTGCCAAATAAC
GGGGGAACTAATGCGTTTTGTTTTGCAGCTGCGTCAGGGGTTGTTAAAATTGCTAGTATA
ATGCGGGATAAGAATAAGAAGCTACCCAACATCATCAGTAAACATGGAAGTGCAATCACA
ATGGCTGCTTTGCTTGGACACAAAGATATGGTAGTATATCTTTACAAGGTCACAGATCTT
GCCGCACTAGACAACTTAGAACGCTTTGAACTTCTCGAAGCCACGATCCAGCATGAGTTG
TATGATGTGGCGTTAGATATTTTCAAGAAAGACACAGCTTTGGCCACTACTATAGTAGAA
GGAAACCGATCACTCTTACATGCGTTAAGTAAGAAGGCTTTAACAATCAGTTGGCGAGAT
CCGGATGGGAAGTGGAAAAGGTTCGTTCATATGCTAAATGCCGGAAGTATGCGAGTTTGT
TCTCCAGTGCGGCGAATATTTATTAGTATGATTTCCAGGATGCCATTTATTACACGGTTC
GAAAGGGTTTGGGTTATTCGGGGTAAATCATTGCTGAAGAAGCAAGCTGGTGTGCTACTT
GAGGAGCTCTGGGCAGAGTGTCTACAATTGCCAGAGGCTGAGCTCGCGCGGTTAATCTCA
AAGACCCAAATATTGAATTCTGCTGCAAAAGCAGGAAATGTAGAGTTTTTAGCTGTGCTA
ATTCGTGATCATCCTGATCTGATATGGAAAGTCGACAGAAGAAAGCACACCATTTTTCAT
GTTGCTGCTTTACATCGACAAGAAAAAGTCTATAGTCTTATACACCAAATAGGAGCAGTT
AAAGACTTGATAACTCTTGGTGTTGATGTTGATGGCAATAACATTCTCCATTTGGCTGGT
AAGTTAGGGCAGCCTATCCCTCTCAAACAGAAAATCAGGCAACAATTTGGAGAGATAGAA
GAGCTCAAACAGAAACTTGGGCAGCCAATGCCTTGTAATGATATAATCTTGGAATCTATT
AAGCAGCTTTTGGAAGAGATCCTTCAACAGAGACTGGCTGAGCAAACACCTGCCAATATT
GAATATGAAGAAGCTCTTCAACAATTAATTACTGAGATTGATCAAAAAATTGGACAGCCA
AGCCCTTGCAATATTATAATGAGGAAAGCACTACAAAAACTGATTAGAGAGATCGAAGCC
ATTAAAAAGTTAGCAGAGACAGTGTGCTTTAAGGAGGAAGAGAAGATTATGCCACCGTCA
TTTCTCCGGGTATCTGGAGCAGCTCTTCGACTGCAAAGAGAGATATTGTGGTTTAAGGAG
GTGGAGAAAATTGTACCACCTTCATTTCTCAGGATGAAAAACAATGATGAAAAAACCCCA
AGGCAATTATTCTCAGAAGAACACAAGCTGTTGTTGAAAGAAGGTGAAAGGTGGATGAGA
GACACTGCAAATTATTGTATGATTGTTGCAACTTTGATTGCCACAGTGATGTTTGCTGCA
GCCTTCACTGTGCCAGGCGGTAATAATGACAATGAAGGTACCCCCATAATGCTAAAACTG
AAAGGATTTACGGTTTTTGTCATATCAGATGCAGTGGCAATGTTCTGCTCAATTGTTTCC
ATAATTATGTTCTTGTCCATTCTTACTTCTCGCTACAATGAAGACGACTTTCTTGTGTCA
TTGCCGAAGAAATTACTCCTTGGACTCACTACACTCTTTGCCTCGATAGTTGGCATGCTC
GTGGCTTTTGCAGCAACTTTCTTCTTGGTCTATAATAATCATATGGCTTGGCAGCCAAAG
CTCATTGCTGCTATTTCTGGTGTTCCTGTTGCTTTATTTGGGTGTTTACATTATAAGCTA
TGGTGGGATACTGTAAAATCAACATACTGGTCCAAATTTCTTTTTAAACCGGGAAAGCAC
AGATTGTATTAA

Peptide Sequence

PEP ID

XP_016511453.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107828612 isoform X2 [Nicotiana tabacum]
Sequence

MISRYCSAKSYFDEIEEQDEGGSRSDIENQSPARLQDALLSNSGRKTKCRTPQQILYQAA
LRDDWGAAEPILEKDLSLARAKMTERGERVLHIAAVARSTRFILELVNKMEESDLELPNN
GGTNAFCFAAASGVVKIASIMRDKNKKLPNIISKHGSAITMAALLGHKDMVVYLYKVTDL
AALDNLERFELLEATIQHELYDVALDIFKKDTALATTIVEGNRSLLHALSKKALTISWRD
PDGKWKRFVHMLNAGSMRVCSPVRRIFISMISRMPFITRFERVWVIRGKSLLKKQAGVLL
EELWAECLQLPEAELARLISKTQILNSAAKAGNVEFLAVLIRDHPDLIWKVDRRKHTIFH
VAALHRQEKVYSLIHQIGAVKDLITLGVDVDGNNILHLAGKLGQPIPLKQKIRQQFGEIE
ELKQKLGQPMPCNDIILESIKQLLEEILQQRLAEQTPANIEYEEALQQLITEIDQKIGQP
SPCNIIMRKALQKLIREIEAIKKLAETVCFKEEEKIMPPSFLRVSGAALRLQREILWFKE
VEKIVPPSFLRMKNNDEKTPRQLFSEEHKLLLKEGERWMRDTANYCMIVATLIATVMFAA
AFTVPGGNNDNEGTPIMLKLKGFTVFVISDAVAMFCSIVSIIMFLSILTSRYNEDDFLVS
LPKKLLLGLTTLFASIVGMLVAFAATFFLVYNNHMAWQPKLIAAISGVPVALFGCLHYKL
WWDTVKSTYWSKFLFKPGKHRLY

Transcript Sequence

Gene sequence data has not been registered.